National Nano Device Laboratories (NDL) 
Nano CMOS Device Technology
Nano Energy and Optoelectronic Device Technology
NEMS / MEMS Technology

National Laboratory Animal Center (NLAC)
Quality Control of Laboratory Animal
Reproduction and Breeding Management
Isolator Techniques
Genetic Modification Techniques

National Center for Research on Earthquake Engineering (NCREE)
Seismic Testing and Numerical Simulation Te chnologies
Seismic Resistant Design, Evaluation an d Retrofit Technologies
Earthquake Loss Estimation Technologies

National Space Organization (NSPO)
Satellite System Integration
Spacecraft Bus
Payload Instrument
Mission Operation
Image Processing

National Center for High-performance Computing (NCHC)
High-performance Computing
Cloud Computing
Grid Computing
Information Security

National Chip Implementation Center (CIC)
IC/SoC Design
SoC/SiP Integration Technology
Heterogeneous Integration Technology Platform
Integration Technology for Intelligent Electronic Systems

Instrument Technology Research Center (ITRC)
Remote Sensing Instrumentation
Nano/MEMS Fabrication
Thin Film and Vacuum System
Instrument System Integration
Precision Machining and Optical Inspection

Science & Technology Policy Research and Information Center (STPI)
Technology Foresight and Forecasting Methodologies
National Innovation System Research 
Performance Evaluation
Sci-tech Projects Management 
Integrated Sci-tech Information Service Platform

National Science and Technology Center for Disaster Reduction (NCDR)
Typhoon/Flooding Disaster Response Analysis Improvement Technique
Earthquake Disaster Mitigation and Emergency Response Technique
Research for Adaptation of Climate and Environmental Change
Disaster Prevention and Response Technology R&D and Consolidation Operation

Taiwan Ocean Research Institute (TORI)
Marine Observation and Modeling
Submarine Seismic Observation
Ocean Exploration Technology
Ocean Information Database and Network

Taiwan Typhoon and Flood Research Institute (TTFRI)
Numerical Weather Modeling Techniques
Quantitative Precipitation Forecast Techniques
Hydrological Modeling Techniques
Atmospheric and Hydrologic Observation Techniques